PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62017896-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 225aa MW: 26482.6 Da PI: 4.8812 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83 | 6e-26 | 14 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.........lelee...vikev.d.iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrF+Ptdeelv +++ k++ ++ + + i+e+ d ++++P++L+ ++ ++ +wyf++++ +nr+ ++g AUR62017896-RA 14 LPPGFRFDPTDEELVLHFMYSKLKLSSssrnypsnnC---NnphLIPELeDfFHHYHPRQLHGEAFESCGQWYFYTRKT--------ENRVSENG 97 79********************998886666665443...0443699997645667*****9555455679****9874........58999*** PP NAM 82 yWk.atgkdkevlsk..kgelvglkktLvfy.kg.rapkgektdWvmheyrl 128 yW+ g d+++++ ++lvglkk Lvfy kg a++g+k W+m+ey++ AUR62017896-RA 98 YWEeLVGMDQPIYAGnnCNKLVGLKKWLVFYdKGmYASSGVKNGWFMQEYHA 149 **945799*****97666778**********5446899************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 225 aa Download sequence |
MIENNENMLD MKQLPPGFRF DPTDEELVLH FMYSKLKLSS SSRNYPSNNC NNPHLIPELE 60 DFFHHYHPRQ LHGEAFESCG QWYFYTRKTE NRVSENGYWE ELVGMDQPIY AGNNCNKLVG 120 LKKWLVFYDK GMYASSGVKN GWFMQEYHAC SNNNLFKRRK SKQPAADVMN KWVLCRVQQV 180 CDESQWMNTL NEDKYNNEVE LSSSDEAVFL AMEENDQDEV TYPY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64530.1 | 1e-35 | NAC family protein |