PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017681-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 418aa MW: 46777 Da PI: 8.1943

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017681-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.9	3.9e-53	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkk++ +k+++ evi+evd++k+ePw+L++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + AUR62017681-RA 9 VPPGFRFHPTDEELLHYYLKKKISFQKFDM-EVIREVDLNKMEPWELQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 102 69**************************.99**********963433332556********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle AUR62017681-RA 103 RN-SFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138 9.8899***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGSSNNGGVP PGFRFHPTDE ELLHYYLKKK ISFQKFDMEV IREVDLNKME PWELQERCRI 60 GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSFKKIG MRKTLVFYRG 120 RAPHGQKTDW IMHEYRLEDT DDPQANGEDG WVICRVFKKK NLFKIGGEQG GGTTTSATSD 180 QLLCNPTGSS TANQSRHFIP RDHTNNNPQY PHHLLLRNDP QATSTFDLYM NKPDLGLHSY 240 SHPHQIAPLP PPDYATHPHH LYQASEGGGP TALEVGPCEP SDPHHPGINE WAMLDRVVGH 300 QQDEHHGEQQ ANASANDLTS TSSHPASLKD KTSYIGCATS SAADAASLPI LYGADSFNCT 360 KDSKASCFTN LAHTSGHNFC QVTNNKNLKT RSSSGHQPIQ SNKRLKELLV LVVHSAYA

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGSSNNGGVP PGFRFHPTDE ELLHYYLKKK ISFQKFDMEV IREVDLNKME PWELQERCRI  60
GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSFKKIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLEDT DDPQANGEDG WVICRVFKKK NLFKIGGEQG GGTTTSATSD  180
QLLCNPTGSS TANQSRHFIP RDHTNNNPQY PHHLLLRNDP QATSTFDLYM NKPDLGLHSY  240
SHPHQIAPLP PPDYATHPHH LYQASEGGGP TALEVGPCEP SDPHHPGINE WAMLDRVVGH  300
QQDEHHGEQQ ANASANDLTS TSSHPASLKD KTSYIGCATS SAADAASLPI LYGADSFNCT  360
KDSKASCFTN LAHTSGHNFC QVTNNKNLKT RSSSGHQPIQ SNKRLKELLV LVVHSAYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-130	NAC family protein