PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62017524-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 469aa MW: 54292.4 Da PI: 6.9084 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.9 | 8.8e-14 | 19 | 99 | 16 | 99 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +p k+++++ +++ + +tl+ +g+ W+v+l k +g+++l+kGW+ Fvk Lk g f++F++d+ + e++v++f++ AUR62017524-RA 19 QKIPEKYVKTYYEEQLANDYVTLRVNDGKIWRVEL--FKEGGKVWLSKGWECFVKKYSLKYGYFLLFRFDD-IKYEYHVTIFDT 99 469********444455668***************..9999***************************876.88889****997 PP | |||||||
2 | B3 | 44.3 | 3.1e-14 | 180 | 269 | 7 | 99 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++ks +l++p f++++g++ s ++ l+ s + W+v++ +k + l+kGW++Fv+ +L+ g +vF+ldg + +++v +++k AUR62017524-RA 180 KLVTSKSPILRIPVVFVKKYGEQ--LSDDVYLNVpNSEKPWKVEM--KKENTDMSLGKGWQDFVEFYNLEYGHLLVFRLDGGLQSHFYVVILDK 269 555678889***********966..8889****94555*******..88888899*************************98666678888887 PP | |||||||
3 | B3 | 48.4 | 1.7e-15 | 372 | 467 | 1 | 98 |
EEEE-..-HHHHTT-EE--.HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlp.kkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 f++++ ps+v ++ l++p +++a+++ ++ +s +++l+ ++g+ v + y +k+ + +l+ GWk+Fv +n+Lk+gD ++F+l++r +f + AUR62017524-RA 372 FKSIMCPSHVRNKYTLSVPfNSHASTYfPSD--KSEKIILKGPTGKNHAVGY-YLGKKHAQLLS-GWKHFVWDNHLKVGDACMFELVSRkPNF-Y 461 788999*******999999445576666444..6679***************.66666666666.**********************995555.8 PP EEEEE- CS B3 93 vvkvfr 98 +v+++r AUR62017524-RA 462 KVSIHR 467 888876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 469 aa Download sequence |
MINYLITDIF LATSFYGKQK IPEKYVKTYY EEQLANDYVT LRVNDGKIWR VELFKEGGKV 60 WLSKGWECFV KKYSLKYGYF LLFRFDDIKY EYHVTIFDTT CFEIEYDQEF DNHTKGQQLI 120 KISSQKEGVD QDDNNDHGVI STDAKGVVDF DENKSIIESL EAFKSENPHF KVVMEYQKMK 180 LVTSKSPILR IPVVFVKKYG EQLSDDVYLN VPNSEKPWKV EMKKENTDMS LGKGWQDFVE 240 FYNLEYGHLL VFRLDGGLQS HFYVVILDKS GTEIDYPVRN SHVSKRSADS RELKNGVRED 300 HSHHTEEADD VSLETFDESS PKLNTIDSVI NLDTSDSDDV EGVSFNSKGN DEMRKKNLKK 360 KLDGLKSQYP HFKSIMCPSH VRNKYTLSVP FNSHASTYFP SDKSEKIILK GPTGKNHAVG 420 YYLGKKHAQL LSGWKHFVWD NHLKVGDACM FELVSRKPNF YKVSIHRG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 2e-13 | B3 family protein |