PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017414-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 508aa MW: 56017.1 Da PI: 9.1552

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017414-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.5	1.2e-32	217	273	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers d++++ei+Y+geHnh+k AUR62017414-RA 217 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKVERSL-DGQITEIVYKGEHNHPK 273 9*************************************.*************85 PP
2	WRKY	100.3	1.1e-31	418	475	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkgs++prsYYrCts +C+v+k ver+ +d +++++tYeg+Hnhe AUR62017414-RA 418 GDGFRWRKYGQKVVKGSPYPRSYYRCTSVKCNVRKYVERALDDSRAFITTYEGRHNHE 475 6********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MEVKDIDRVV IKKPVASRPS CTGFRSFSKL HSGAINASPP PANASSEMAV AAIKPKTVRV 60 KSTINQSPHT EEIQASLNLS PMENFYFSEL SVLTFVHSLS QADTSNEALC SSSDTISRAP 120 DRSTIFKPLA KVVSKATVSI LLSMGNSSVT HRQALSQVNV PAQKEKLHLF SSQHSSNLPR 180 VELAESAKSP TMAQQMVEGE SRIMASSITG ADQPSCDGYN WRKYGQKQVK GSEYPRSYYK 240 CTHLKCPVKK KVERSLDGQI TEIVYKGEHN HPKPDHAKRS SSGVHGQELF AGTNQDPNSS 300 DPKLHDNICE KNEGFERQMS NENEMQLSKQ STFPVNDAPV CHPVDAEKNN PSDKTVVDSA 360 GLGGGCEESA KGLNANGGRI KNKRRKQNVQ NNETGKSGEG VQEPCIWVHN INEPEIMGDG 420 FRWRKYGQKV VKGSPYPRSY YRCTSVKCNV RKYVERALDD SRAFITTYEG RHNHEMPMKI 480 MNLAAVPEQE TQPPAGKEIR TLMPIVS*

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MEVKDIDRVV IKKPVASRPS CTGFRSFSKL HSGAINASPP PANASSEMAV AAIKPKTVRV  60
KSTINQSPHT EEIQASLNLS PMENFYFSEL SVLTFVHSLS QADTSNEALC SSSDTISRAP  120
DRSTIFKPLA KVVSKATVSI LLSMGNSSVT HRQALSQVNV PAQKEKLHLF SSQHSSNLPR  180
VELAESAKSP TMAQQMVEGE SRIMASSITG ADQPSCDGYN WRKYGQKQVK GSEYPRSYYK  240
CTHLKCPVKK KVERSLDGQI TEIVYKGEHN HPKPDHAKRS SSGVHGQELF AGTNQDPNSS  300
DPKLHDNICE KNEGFERQMS NENEMQLSKQ STFPVNDAPV CHPVDAEKNN PSDKTVVDSA  360
GLGGGCEESA KGLNANGGRI KNKRRKQNVQ NNETGKSGEG VQEPCIWVHN INEPEIMGDG  420
FRWRKYGQKV VKGSPYPRSY YRCTSVKCNV RKYVERALDD SRAFITTYEG RHNHEMPMKI  480
MNLAAVPEQE TQPPAGKEIR TLMPIVS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	5e-78	WRKY family protein