PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017199-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 284aa    MW: 32307.8 Da    PI: 7.7118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017199-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.46.9e-1592144155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++i + ++ Lr llP++   ++kK ls   ++ +AveYI +Lq
  AUR62017199-RA  92 KKLNHNASERVRRKKISNLYSSLRALLPSS---DHKKrLSIPGTVVRAVEYIPELQ 144
                     6789*************************7...55555***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MSSICPTYLG WDYPIDLGTI QGFNNVDLDS VFLLNFSSSH QSQDYQYHEH DHVKRRESPQ  60
GTSSIDVKRS DLPQDTSSTD HLFDNNPISL SKKLNHNASE RVRRKKISNL YSSLRALLPS  120
SDHKKRLSIP GTVVRAVEYI PELQKEVENL ISRKNELLSK VSLIQGNARE IIIQEEKPMT  180
KNRTIKDTFS CSISLNKMGD KEMVIQISAL EKISLSEVLD LLEKKGYLVI DISSFHSFGG  240
TTFYNTSINL WMGESHTVKF ENLNKVLMSL LMEQKPMQMQ VHC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-38bHLH family protein