PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017056-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 581aa MW: 62913.7 Da PI: 7.9177

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017056-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.5	5e-32	192	249	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers d++++ei+Y+g+H+h+k AUR62017056-RA 192 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSP-DGTITEIIYKGQHDHPK 249 8**************************************.*************85 PP
2	WRKY	108.1	4.4e-34	367	425	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct++gCpv+k+ver+++dpk+v++tYeg+Hnhe AUR62017056-RA 367 LDDGYRWRKYGQKVVRGNPNPRSYYKCTHPGCPVRKHVERASHDPKAVITTYEGKHNHE 425 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MSPAKLPISR SSCISVPPMF SPTSFLESPV FLSNLKGEPS PTTGSFFKPQ MMQNSSSGST 60 TYPSVINSSN TFDNSQSSGF EFKPNTGSYS FGGFAFSGSL ASSSDLIQQQ AGQANQVQPE 120 CPPQSSDPPV AVKSEPAPVN EQRPTMVPPS SGLPTEADSN EFNQKSESNN EGQTPPSEQK 180 VLGSQVSERT SDDGYNWRKY GQKLVKGSEF PRSYYKCTHP NCEVKKLFER SPDGTITEII 240 YKGQHDHPKP QPNRRLPAGS MLSALEDKSD RVTPFNGQEG MPANSYGQTA NNNEPGGTPD 300 QSPGGANDNS GEIGANQLNR ITEDADDDDP YAKRRRMEIG EMDINSVVKP IREPRVVVQT 360 VSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTHPGCPV RKHVERASHD PKAVITTYEG 420 KHNHEVPTAR NSSHDTAAPQ AQSMASRMGS REGNDAVSLD LGVGIRSGSG FVPGHQQQQA 480 MGGEHLPGQP QFSSHNLLLL QQNPMSTFPG YVNGGMVLYG SRENHSQGHS IGNQPDHSKS 540 RAKRMGSIAK SFATPPNKTL LVKALVLLVA QAAQLALRLP *

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MSPAKLPISR SSCISVPPMF SPTSFLESPV FLSNLKGEPS PTTGSFFKPQ MMQNSSSGST  60
TYPSVINSSN TFDNSQSSGF EFKPNTGSYS FGGFAFSGSL ASSSDLIQQQ AGQANQVQPE  120
CPPQSSDPPV AVKSEPAPVN EQRPTMVPPS SGLPTEADSN EFNQKSESNN EGQTPPSEQK  180
VLGSQVSERT SDDGYNWRKY GQKLVKGSEF PRSYYKCTHP NCEVKKLFER SPDGTITEII  240
YKGQHDHPKP QPNRRLPAGS MLSALEDKSD RVTPFNGQEG MPANSYGQTA NNNEPGGTPD  300
QSPGGANDNS GEIGANQLNR ITEDADDDDP YAKRRRMEIG EMDINSVVKP IREPRVVVQT  360
VSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTHPGCPV RKHVERASHD PKAVITTYEG  420
KHNHEVPTAR NSSHDTAAPQ AQSMASRMGS REGNDAVSLD LGVGIRSGSG FVPGHQQQQA  480
MGGEHLPGQP QFSSHNLLLL QQNPMSTFPG YVNGGMVLYG SRENHSQGHS IGNQPDHSKS  540
RAKRMGSIAK SFATPPNKTL LVKALVLLVA QAAQLALRLP *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-154	WRKY family protein