PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62016579-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 394aa MW: 44536.8 Da PI: 5.9065

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62016579-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.8	5.1e-05	259	282	32	55
..TTS-STCHHHHHHHHHHHHHHH CS HLH 32 kapskKlsKaeiLekAveYIksLq 55 + ++ + +Ka+iL+++ eY+k+L+ AUR62016579-RA 259 GKDDSRTDKASILTETAEYLKQLE 282 456788****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MLLMMCGSLI ADAQTIWSLF RDLDESQKSE VRLGDGNQVQ VKGKGTIAIK TIQGDVKLLH 60 NVQYVPSLAH NLLSVGQLIE SRYSVFFEDV SNDFNRALVA KESSETRLWH LRYGHLNVKG 120 LKLLSNREMV VGLPKIGEMF CKQVFFSKFM DILSGEWLSD LVNEDPTLIM NDYQMMMSSH 180 GNEDAFEFED IFQTPDVMFD TNNPALIKGD NFKSVMEVTN KITPNIDRSW SSSGQLICFG 240 SSTNFETTNP KLSNGSKKGK DDSRTDKASI LTETAEYLKQ LEERAKVLEE QTSKRTMESV 300 CLVKKKQRHT LNDNSATSYS NDHQYSNKTI NFDDNLEIEA KVLNNNILIR VHSLKVQGLI 360 QKIIEEIGTL NMTPLNYQAM PFGSYAIIVT IVAK

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MLLMMCGSLI ADAQTIWSLF RDLDESQKSE VRLGDGNQVQ VKGKGTIAIK TIQGDVKLLH  60
NVQYVPSLAH NLLSVGQLIE SRYSVFFEDV SNDFNRALVA KESSETRLWH LRYGHLNVKG  120
LKLLSNREMV VGLPKIGEMF CKQVFFSKFM DILSGEWLSD LVNEDPTLIM NDYQMMMSSH  180
GNEDAFEFED IFQTPDVMFD TNNPALIKGD NFKSVMEVTN KITPNIDRSW SSSGQLICFG  240
SSTNFETTNP KLSNGSKKGK DDSRTDKASI LTETAEYLKQ LEERAKVLEE QTSKRTMESV  300
CLVKKKQRHT LNDNSATSYS NDHQYSNKTI NFDDNLEIEA KVLNNNILIR VHSLKVQGLI  360
QKIIEEIGTL NMTPLNYQAM PFGSYAIIVT IVAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22770.1	7e-13	bHLH family protein