PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016230-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 318aa    MW: 34587.4 Da    PI: 7.8654
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016230-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.95.1e-34123181159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s+fprsYYrCt+a C vkk+vers++dp+vv +tYeg+H+h+
  AUR62016230-RA 123 LDDGYRWRKYGQKAVKNSPFPRSYYRCTTAACGVKKRVERSSDDPSVVMTTYEGQHTHP 181
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MFGYNNSLFD VPGATPFDML MMGTGGGGFD KDPCFSGCST IVVPGDSSEA VNTPATPNSL  60
SISSSSSDAV NDDLPHQQSK TADGHDHHEE DKTKKQLKPK KKNQKRPKEP RFAFMTKSEV  120
DHLDDGYRWR KYGQKAVKNS PFPRSYYRCT TAACGVKKRV ERSSDDPSVV MTTYEGQHTH  180
PCPVMTRGGI GISIGMGMFS MPNHLNQCST APTTPSAFGG SGAASSTLLF PHPQHYHQSN  240
NLYPQHQQQQ FPSFFHNPTP TSLSFSASGG AGQQQPNSIA LLRPPCSSSS NQVRDDGLLQ  300
DIVPSQMRND QQPTKEE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.11e-44WRKY family protein