PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016200-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 258aa MW: 29135.8 Da PI: 4.0825 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 84.7 | 1.8e-26 | 12 | 114 | 1 | 99 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppG+rF+P +el+++yLk+k++g +l++ + i+ev +i+ + P+dL + + k+++k+wyfF++r++ky+ g+r+ +++++g+Wkatgkd+ AUR62016200-RA 12 LPPGYRFEPYTKELINHYLKPKINGFDLPM-NPIHEVdNINVYGPEDLTArfipQGKGKSKSWYFFTSRNRKYHDGSRPDKKASDGFWKATGKDH 105 79****************************.88****779999*****8546666666888********************************** PP NAM 91 evlskkgel 99 ++++ + + AUR62016200-RA 106 PIIDDDAAS 114 **9964433 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MEEKPGESFN NLPPGYRFEP YTKELINHYL KPKINGFDLP MNPIHEVDNI NVYGPEDLTA 60 RFIPQGKGKS KSWYFFTSRN RKYHDGSRPD KKASDGFWKA TGKDHPIIDD DAASSATTIM 120 MAWLTTNNNL ISYDNNDGLV NRSNLISYDN NNDGLVNNSN LISYDNNIDG LVNSSNLISY 180 DNNDDGLVNS SNLISYDNND GLVNSNNLIS YDDDGLNNSI YGDLQDLVPD FDSLYDKIMT 240 EVLFDQIDFT NWALDFF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03200.1 | 6e-22 | NAC family protein |