PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016072-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 197aa MW: 22020.5 Da PI: 4.5669 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43 | 8.3e-14 | 49 | 101 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ h+e+Er+RR ++ + ++ Lr+ lP+ ++K s ++ L +Av+YIk+L+ AUR62016072-RA 49 KKAIHKEVERQRRLEMSNLYSSLRSTLPPeY---VKGKRSTSDHLAEAVNYIKDLE 101 5778*************************77...9******************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MFPFQRSGEL SFQTTEFVAE EEQIDAENQI YWLDGAPLNI EGNMNTANKK AIHKEVERQR 60 RLEMSNLYSS LRSTLPPEYV KGKRSTSDHL AEAVNYIKDL EKNIQELSDK RDQLKAAPES 120 PTSTYQVGSS SNPRPSLGSV EINPCLGGLD IDINAGYEDE SFTLSSALQV IFEEGLSVTS 180 CSSTKVNQRI IHKIVCE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12540.1 | 1e-36 | bHLH family protein |