PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015908-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 330aa    MW: 37030.6 Da    PI: 6.1663
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015908-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.85.8e-20107166359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     Dgy+WrKYG K++ ++++pr YYrC ++   +C+++k+v++ +  p+   i+Y  +H+++
  AUR62015908-RA 107 DGYAWRKYGEKSILNTKHPREYYRCGYRddqNCQATKHVQKISGSPTKYRIIYYAHHTCN 166
                     9**************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MDMKVLEEEL KKGWEATSQL RSLLLFPPEL ECGNASSNRD YQNQSSQNDK ILPFLESHYA  60
TIINSFDSSI SILKQLSQSS KPSICQKSKV GQKSRSRMIE TSNLEPDGYA WRKYGEKSIL  120
NTKHPREYYR CGYRDDQNCQ ATKHVQKISG SPTKYRIIYY AHHTCNPLLH SNFVSQIHVS  180
DSSEKDFSNL ISFESKNPTQ IPKQNINEPF CALIFPSSSN KSSKELSPQN GEFPSLSKTT  240
NNPPPSLVDS MKNPNPQVVS NAIIGDVNQQ QGVVLSPSML MSPNYMATSY VDIDGCDLAA  300
GYEQLYDMDG ALQLQDIPFA EMNVSPMWE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.11e-20WRKY family protein