PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62015630-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 279aa MW: 30847.9 Da PI: 9.2385

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62015630-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.9	7.9e-53	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeel+v+yL++kv+g++++l ++i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ AUR62015630-RA 14 LPPGFRFYPTDEELLVQYLCRKVAGHQFSL-QIIAEIDLYKFDPWVLPSKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT- 106 79*************************9.89***********8777899*******************************9999. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+kk Lvfy g+apkg+kt+W+mheyrl AUR62015630-RA 107 QGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGVQEKDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGHQ FSLQIIAEID LYKFDPWVLP 60 SKAMFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTQGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLT ENTRKTGSSK LDDWVLCRIY KKNSSAAKPT MSKETSTTGE 180 TSSSSSSHLD DVMESLPEID DRSFALPRMN SLKNNNNQLG SGSFDWAVLA GLTAAPEFAF 240 TGSAQPQAGQ VNNISNNGND LFIPSLPPLS QVETALGC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-128	NAC family protein