PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015573-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 241aa    MW: 27079.8 Da    PI: 4.0066
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015573-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ l+  ++ +G  +W++ ++  g+ R++k+c++rw +yl
   AUR62015573-RA 14 KGPWTPEEDQTLISFIQHHGHSNWRALPKQAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MGRAPCCDKV GLKKGPWTPE EDQTLISFIQ HHGHSNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGNF SREEEDTIIQ LHEMLGNSFP ESTSDHIANS GSPQQSSLTS DDMSSSGTEI  120
SSIEVPSDTS FIINVQTFDN SIQQSANLDY LPIIDETFWE PQDLLPSLDA SEFDSIMEDN  180
DQMVQFETFF SEQEQKNNSI NVQVYDNNAG LVNYGDAEDN MDFWLDVFVQ AGGAPELPEF  240
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-56MYB family protein