PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62015520-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28310.3 Da PI: 6.311 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178.2 | 2.2e-55 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eelv++yL++kv ++++e+ ++ike+d+yk+ePwdL++ +k+ +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ AUR62015520-RA 7 VPPGFRFHPTEEELVDYYLRRKVCSRRIEV-DIIKEIDLYKIEPWDLQELCKTgddDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69****************************.99**************953333233556************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k+ l+g++ktLvfykgrap+g+k+dW+mheyrle AUR62015520-RA 101 YC-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 **.8899****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MNTSTQVPPG FRFHPTEEEL VDYYLRRKVC SRRIEVDIIK EIDLYKIEPW DLQELCKTGD 60 DDQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YCKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GAPQNSKMLL ASPHGTGTYN NTGLAPYDVL DQVTDWRVLD 180 KFVASQLSHE DVAKGHDNDN NNNNYSSSNV ASGIFPSAPI SDHSNKEDSL TDKTSTLTSS 240 SQIDVWKS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 3e-83 | NAC family protein |