PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014768-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 344aa MW: 38527.1 Da PI: 8.5834

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014768-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.3	3.1e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+v+yLk+k+++++l++ +i+evd+yk++Pw+Lp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ AUR62014768-RA 15 LPPGFRFHPTDEELIVHYLKRKASSSPLPV-AIIAEVDLYKFDPWELPSKAIFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTS 108 79**************************.88***********7777799*********************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ p+g ktdW+mheyr+ AUR62014768-RA 109 nGNQKVGVKKALVFYGGKPPRGIKTDWIMHEYRV 142 67788*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MESTDSSSTQ PYPQLPPGFR FHPTDEELIV HYLKRKASSS PLPVAIIAEV DLYKFDPWEL 60 PSKAIFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG NQKVGVKKAL 120 VFYGGKPPRG IKTDWIMHEY RVIDANSSSK LPHPLVDHPS KKASLRLDDW VLCRIYKKNN 180 TQRPMDHERD DLIEEMIKQQ KLMRTICPKN TPSNGLLMDH TNNDQNIYEF TQLGPSTSRH 240 DLYGMQGDDS NKREHLYWDD PMGSVGSSSG RRFHHVQSDQ TTGSTGTDGN SSSFVSMLSQ 300 LPHQGINNTS GVPYSMGSPL LVGNIGDGVL RPPFQLSGGT WNS*

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MESTDSSSTQ PYPQLPPGFR FHPTDEELIV HYLKRKASSS PLPVAIIAEV DLYKFDPWEL  60
PSKAIFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG NQKVGVKKAL  120
VFYGGKPPRG IKTDWIMHEY RVIDANSSSK LPHPLVDHPS KKASLRLDDW VLCRIYKKNN  180
TQRPMDHERD DLIEEMIKQQ KLMRTICPKN TPSNGLLMDH TNNDQNIYEF TQLGPSTSRH  240
DLYGMQGDDS NKREHLYWDD PMGSVGSSSG RRFHHVQSDQ TTGSTGTDGN SSSFVSMLSQ  300
LPHQGINNTS GVPYSMGSPL LVGNIGDGVL RPPFQLSGGT WNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-102	NAC family protein