PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014656-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 471aa MW: 51079.8 Da PI: 4.8539

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014656-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.7	1.3e-05	361	398	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L AUR62014656-RA 361 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 398 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MGEEFQGGVC GGTWWNPPHN LFSSGLSSPC SVAQLGGAGF DVGSFGWPNE LVVKGSNNNK 60 SSNNNNSVFD NLIFSDQLDS SLDILGFGLS PTSSTTDWNN HQNLLCNNNG SNEANFDSML 120 QDNMNSTSLC NSYEMGVNSP NIMNTTNFCN NTQDASPPFT LTASSNNSGD SSTITCDGSL 180 ATSFPMNSSA SYLIQSLFDD SDESHQVPQP QSMPHHQFIN SSNNNYASLD SSNEIMSSNS 240 WVKTSPNNTT STLPSPQIPL LQSNKIDGGM NASLINDQGQ VFSGQYSPTT LSSIRASLLN 300 SLQSRARGPS SFKYKSHSSN TKGNSEEHRR ESKNNTSNND QPQAKRPRIE TPSPLPTFKV 360 RKEKLGDRIT ALQQLVSPFG KTDTASVLHE AIEYIKFLHD QVNVLSTPYL KNGTAMQQKE 420 GDKSKDNEDS NQDLRSRGLC LVPISSTYPV AQETPVDFWT PTFGGTTTFM *

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MGEEFQGGVC GGTWWNPPHN LFSSGLSSPC SVAQLGGAGF DVGSFGWPNE LVVKGSNNNK  60
SSNNNNSVFD NLIFSDQLDS SLDILGFGLS PTSSTTDWNN HQNLLCNNNG SNEANFDSML  120
QDNMNSTSLC NSYEMGVNSP NIMNTTNFCN NTQDASPPFT LTASSNNSGD SSTITCDGSL  180
ATSFPMNSSA SYLIQSLFDD SDESHQVPQP QSMPHHQFIN SSNNNYASLD SSNEIMSSNS  240
WVKTSPNNTT STLPSPQIPL LQSNKIDGGM NASLINDQGQ VFSGQYSPTT LSSIRASLLN  300
SLQSRARGPS SFKYKSHSSN TKGNSEEHRR ESKNNTSNND QPQAKRPRIE TPSPLPTFKV  360
RKEKLGDRIT ALQQLVSPFG KTDTASVLHE AIEYIKFLHD QVNVLSTPYL KNGTAMQQKE  420
GDKSKDNEDS NQDLRSRGLC LVPISSTYPV AQETPVDFWT PTFGGTTTFM *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	2e-51	bHLH family protein