PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62014614-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 27421.2 Da PI: 6.7057 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.3 | 2.8e-08 | 84 | 134 | 4 | 54 |
HHHHHHHHHHHHHHHH...HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsa...feeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE++RRd++N++ f eL e+l + +++K +Ka+iL+ A++ +k L AUR62014614-RA 84 SKACREKQRRDHLNERhvqFLELSEILESG---TKPKFDKAAILTDAIRQVKLL 134 6789**********976669*********9...9**************977765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MESLEDEEFD LNWVCCLLDD IPSTCCDSSA MQPDIPLPIA RFDSFPSSTF LSEATQDSIE 60 SLYGFDVCCR KRVRVGSVTA SSSSKACREK QRRDHLNERH VQFLELSEIL ESGTKPKFDK 120 AAILTDAIRQ VKLLREETSN LTSQNGELKE KINELKVKKK ALRGEKHRLV SEKEKLEQRI 180 KSVASHPSLH FHPTSVPSSY AIPCQAVGGK LMPLINYSGV PFWQFAPQAA FDTSQDHVFH 240 PPVA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 2e-48 | bHLH family protein |