PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62013224-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 171aa MW: 19014.9 Da PI: 10.0083 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.2 | 1.5e-08 | 1 | 36 | 16 | 55 |
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++s f++L +llP++ +K +K +++e+Av+YIk Lq AUR62013224-RA 1 MRSMFATLHSLLPQL----TPKADKTTVVEEAVNYIKTLQ 36 6799**********9....69******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 171 aa Download sequence |
MRSMFATLHS LLPQLTPKAD KTTVVEEAVN YIKTLQNTVK RLEIQKIEQN QGLPPIMSSS 60 FPIGPSVPAN SRLATLPTTR EAFMANQVSL MNNNNNYSTG SSRAVKIKTW TASNVVLSIC 120 GNVAQYAVYA TKKPVLFTTI CSVLEKYAME IFAANIYTDD ANRSHFMFQT R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49770.1 | 3e-30 | bHLH family protein |