PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62013128-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CAMTA

Protein Properties

Length: 965aa MW: 107247 Da PI: 5.3882

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62013128-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	142.2	1.5e-44	14	96	36	118
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+e+n+ fqrr+ywlLeee+ +iv+vhylevk AUR62013128-RA 14 GGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEDNECFQRRSYWLLEEEYMHIVFVHYLEVK 96 59******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 965 aa Download sequence
MADRGSIPPG IRLGGSLFLF DRKILRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH 60 CYYAHGEDNE CFQRRSYWLL EEEYMHIVFV HYLEVKGNRS SIRETESVIS GSQISNSVSS 120 SVSNSYNEAF TGNTGSPSAV SSLTSSYEEI ESEDNHQAMS KYPSPVNFQN IEDTFENNKS 180 GSLMNSNFIP TYPDDYKGSQ LPGPGLDYTS LAQRGAGTND YNQLKTLDLG SWEEVFQQCT 240 RGPENLLPNP LLSGAPLVGS TDGYNESFSQ LLDAGFGVNG APGASLAPYL QSNNPLELSF 300 TEYQDNTNIT ATAKQPLLGS IRAEEGLQKV DSFNKWMTKE LAEVDDLDLK STSNLSWQNI 360 ETAASVDDPS IQLEDYSMSP SIGQDQLFDI QDFSPSCAST DSETKVVITG KFMVSPSEVF 420 KYNWSCMFGE VEVPAEVLGN GVLCCYAPLH SVGRVPFYVS CSNRFACSQV REFEYVVEGK 480 KDKNMVSSMT ENQLWLRLQK LLSISSPGNF DSTSESIRKK EPIFRKIFLL MEDELVLGVE 540 QHLKEKVVSW LFDKVSSEDG KGPNTLDEEG QGLLHLAAAL GFDWIIPPTL AAGVSLNFRD 600 INGWTALHWA ACYGREKTVA FLVALEAGSG LVTDPSPEFP LGRTAADLAS AKGYKGISGF 660 LAEHSLTDHL EALTMTDRKK DSPVENSMNN AVQTMREKMA TPGDEGDGSD LSLKDSLAAV 720 RNATQAAGRI HQVFRMQSFQ RKHISKGAGD DESLLTDEQF LSLVSSKIKR PGHPDEKAHS 780 AATHIQKKFR GWKKRKEFLT IRERVVRIQA HVRGHQARKR YKPVVWSVGI LEKAILRWRR 840 KGTGLRGFRS DALNKAASST DAPPVVQKPP SEEDDYDYLK EGRKQTEERL QKALVRVKSM 900 VQYPDARAQY RRLLTAVEGF QKNQSQVQDS TLNSADIAPA EGEDDMIDVE SLLDDDNFMA 960 IAFE*

Sequence ? help Back to Top

Protein Sequence Length: 965 aa Download sequence

MADRGSIPPG IRLGGSLFLF DRKILRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH  60
CYYAHGEDNE CFQRRSYWLL EEEYMHIVFV HYLEVKGNRS SIRETESVIS GSQISNSVSS  120
SVSNSYNEAF TGNTGSPSAV SSLTSSYEEI ESEDNHQAMS KYPSPVNFQN IEDTFENNKS  180
GSLMNSNFIP TYPDDYKGSQ LPGPGLDYTS LAQRGAGTND YNQLKTLDLG SWEEVFQQCT  240
RGPENLLPNP LLSGAPLVGS TDGYNESFSQ LLDAGFGVNG APGASLAPYL QSNNPLELSF  300
TEYQDNTNIT ATAKQPLLGS IRAEEGLQKV DSFNKWMTKE LAEVDDLDLK STSNLSWQNI  360
ETAASVDDPS IQLEDYSMSP SIGQDQLFDI QDFSPSCAST DSETKVVITG KFMVSPSEVF  420
KYNWSCMFGE VEVPAEVLGN GVLCCYAPLH SVGRVPFYVS CSNRFACSQV REFEYVVEGK  480
KDKNMVSSMT ENQLWLRLQK LLSISSPGNF DSTSESIRKK EPIFRKIFLL MEDELVLGVE  540
QHLKEKVVSW LFDKVSSEDG KGPNTLDEEG QGLLHLAAAL GFDWIIPPTL AAGVSLNFRD  600
INGWTALHWA ACYGREKTVA FLVALEAGSG LVTDPSPEFP LGRTAADLAS AKGYKGISGF  660
LAEHSLTDHL EALTMTDRKK DSPVENSMNN AVQTMREKMA TPGDEGDGSD LSLKDSLAAV  720
RNATQAAGRI HQVFRMQSFQ RKHISKGAGD DESLLTDEQF LSLVSSKIKR PGHPDEKAHS  780
AATHIQKKFR GWKKRKEFLT IRERVVRIQA HVRGHQARKR YKPVVWSVGI LEKAILRWRR  840
KGTGLRGFRS DALNKAASST DAPPVVQKPP SEEDDYDYLK EGRKQTEERL QKALVRVKSM  900
VQYPDARAQY RRLLTAVEGF QKNQSQVQDS TLNSADIAPA EGEDDMIDVE SLLDDDNFMA  960
IAFE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein