PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013022-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 365aa    MW: 41477.4 Da    PI: 5.1098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013022-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.64e-07326351630
                     HHHHHHHHHHHHHHHHHHHCTSCC.C CS
             HLH   6 nerErrRRdriNsafeeLrellPk.a 30 
                      ++Er+RR+++N+++  Lr+l+P+ +
  AUR62013022-RA 326 LMAERKRRKKLNERLYHLRSLVPNiS 351
                     589********************844 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MSIVSSPMDS LRQLVNSKTW DYCVLWKLSE DQRFLEFMDS CCAGSEGIME NNGNTVGEEL  60
LFPCRDMTFQ HMRTRSCELL AQLPSSHPLD GMNMEILISN QPKWLNFSNV SDINVNEVSI  120
GTKLLIPIPG GLAELFAAKQ INEDQNVIDY VMTQCTTLMD QAAISSSSNA GPSFTMNINM  180
INELQSNPTL SDQNNAISMN NESQSSMNFL QQFNYVSETN KMSRNNFFDE ANDSFQAENH  240
HQLNSFKSLS ENGFEDLMNN ANSMHNMHVL DHSANDHQHL DEKGSLPKHE IGRANSVSDS  300
DPLEDDDDDP KYHRRKPTKG PQSKNLMAER KRRKKLNERL YHLRSLVPNI SKVKVYVQLY  360
YVYI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1314335RRKPTKGPQSKNLMAERKRRKK
2329336ERKRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.11e-57bHLH family protein