PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011926-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 294aa    MW: 32053 Da    PI: 9.374
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011926-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.31.1e-112622942253
                     EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEE CS
            WRKY  22 rsYYrCtsa.gCpvkkkversaedpkvveitYe 53 
                      +YY+C+s  gCp++k+ver+ edp+++++tYe
  AUR62011926-RA 262 EGYYKCSSMrGCPARKHVERCLEDPSMLIVTYE 294
                     68****9988**********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEGVEEANKA AIESCHRVLN ILSQSQDQTQ FWNLGSETQQ AVTKFKRVVS LLSNGLGHGR  60
ARIVKHNRST ATPFTQTLFQ ESSNVPKIEP SSSNQQPVTT TFQLLKPNLN ESSIQENGST  120
TGKSCLSLGG NLSLELNSGA KTTPIQAEML YRRSNSGINL NFDNSSCTPT MSSTRSFISS  180
LSVDGSMANL DGNAFNLIGV SQSSDQLLSQ HRKRCSGKGE DGSVKCGSSG RCHCSKKRKH  240
RVKRSIKVPA ISNKLADIPS DEGYYKCSSM RGCPARKHVE RCLEDPSMLI VTYE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.13e-77WRKY family protein