PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011824-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 278aa    MW: 31003.9 Da    PI: 9.5963
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011824-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.7e-13194235955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  AUR62011824-RA 194 NKRRRQRINEKMKALQKLIPNS-----NKTDKASMLDEAIEYLKQLQ 235
                     69*******************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGNQVSNGSP VTGKVILLDG SIQEFDKPLT VAELMLEYPQ QMVVDLKSTT TQKKPTPLPA  60
DKTLEVDKIY LMVPLRKGKL AHLSPQEAHH ILLRSKTFNS SSKFIPLFAK ICPAMSNIED  120
NYDKSAVSKR EVLGSDDRKM EEGGEFDDEG LDLIEKPDYL SRQVSGKSWK PSLDTIEEKK  180
NEIKKVSNWV IVANKRRRQR INEKMKALQK LIPNSNKTDK ASMLDEAIEY LKQLQLQVQR  240
KFRGVPLVCC VPKLRKVGIE GGGSKGCFLG AAYGEGD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.16e-22bHLH family protein