PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62010948-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 187aa MW: 20277.9 Da PI: 7.9077 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.3 | 0.00015 | 51 | 90 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq AUR62010948-RA 51 VRKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 90 57778889999999999998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
METNNWEEQV VLQQQQANHH PHLCNSNASG GAVAKKAKVQ PSTTPSTAFK VRKEKLGDRI 60 TALHQLVSPF GKTDTASVLL EAIGYIRFLQ SQIEALSLPY LNTGAGNKMQ PHPIQGERKC 120 IFPEDPGQLL NDNCLKRKGG PDQDSYEEAK DLRSRGLCLV PVSCTLHVGS DNGADYWAPA 180 LGGGFR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 2e-68 | bHLH family protein |