PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010325-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 243aa    MW: 26064.4 Da    PI: 8.487
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010325-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000611271631354
                     HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R+++ ++++ L++l+ +      +K + +++L +A+ YI+ L
  AUR62010325-RA 127 REKLGERIAVLQQLVSPY-----GKTDTSSVLHEAMGYIRFL 163
                     8899999********999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGENGGKEGE IHLPGGSFSR LLLSLEDVEE KGFSVDSPVS PTLFSSNTPN MLCFGDFISK  60
TTPKFSLTTA NTNNLTPSNS NKRRNEPVKE SGNGSTNGQN QKNGVKKNKT EMGPIVTSSP  120
RHVKGKREKL GERIAVLQQL VSPYGKTDTS SVLHEAMGYI RFLHDQVKVL STPYLKLSPS  180
SSHHSKFEKG GPSAMEMDSM EGLSSRGLCL VPLECILHVA NNNGADFWSS ATITSPGPGL  240
EI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.12e-33bHLH family protein