PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62010242-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 256aa MW: 28517.8 Da PI: 7.6259 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.4 | 2.6e-13 | 74 | 117 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er RR++++s f++L +llP++ + K +K +i+e+Av+Y+k Lq AUR62010242-RA 74 TERERRKKMRSMFATLHSLLPQL----NAKADKTTIVEEAVNYVKTLQ 117 6*********************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MAHEINHEND AFLWETQSWV NLSNDTADNS SGEKVVSVPA AEPTGERKRR RTAAMKGKGK 60 EGEGPSEHEI HIWTERERRK KMRSMFATLH SLLPQLNAKA DKTTIVEEAV NYVKTLQNTV 120 ERLEIQKIER NQGLPPMSTF PIGPPLPATS RLATLPTREA PVKIKTWTAS NVVLSICGNI 180 AQYAVYATKK PVLFTTICSV LEKRDGTTAL FVGILLTLKP DAIRSEREVV IAKAMLLEEL 240 DDILLREYME IGQAD* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 47 | 51 | RKRRR |
2 | 47 | 52 | RKRRRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 3e-35 | bHLH family protein |