PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009710-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 492aa MW: 53898.2 Da PI: 8.4094

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009710-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	1e-32	167	224	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkk+er d++++ei+Y+g+Hnh+k AUR62009710-RA 167 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPMKKKIERGI-DGQITEIVYKGTHNHPK 224 7**************************************.*************85 PP
2	WRKY	107.1	8.6e-34	342	400	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+++Cpv+k+ver+a+d ++v++tYeg+Hnh+ AUR62009710-RA 342 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERAAHDLRAVITTYEGKHNHD 400 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MSSFTDLLNS GAAAVSSDNS SLTAANRSLS DRIADRTGSG IPKFKSLPPP SIPISPPPIS 60 PSSYFAIPPG LSPTDLLDSP VLLSSSNEQA IRGRENQQPP PLTQQQSWNF GDQNKQNNEQ 120 SSNSITTMVK SEYPSESYNQ GNVVQYEGEQ NPSFQPAQYI REQRKSEDGY NWRKYGQKQV 180 KGSENPRSYY KCTFPNCPMK KKIERGIDGQ ITEIVYKGTH NHPKPVNTRR SSASAVSAAF 240 QQGSVPQSSN DYHDHSFGPQ KSSSGQMDSV ATPENSSISM ADDEVGSQRS RSAGTDLDDV 300 DQPEAKRWRG EVENECMSAA PGSRAVREPR VVVQTTSDID ILDDGYRWRK YGQKVVKGNP 360 NPRSYYKCTH PNCPVRKHVE RAAHDLRAVI TTYEGKHNHD VPAARGSGMS RAVAPPNNGA 420 VPAMAIRPSA VNYMSSNAGN SHSYQTNQVM PSSFEGAGPL SPFTLQLLQN TGNFGFSGYL 480 NQPQYSDNNM FS

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MSSFTDLLNS GAAAVSSDNS SLTAANRSLS DRIADRTGSG IPKFKSLPPP SIPISPPPIS  60
PSSYFAIPPG LSPTDLLDSP VLLSSSNEQA IRGRENQQPP PLTQQQSWNF GDQNKQNNEQ  120
SSNSITTMVK SEYPSESYNQ GNVVQYEGEQ NPSFQPAQYI REQRKSEDGY NWRKYGQKQV  180
KGSENPRSYY KCTFPNCPMK KKIERGIDGQ ITEIVYKGTH NHPKPVNTRR SSASAVSAAF  240
QQGSVPQSSN DYHDHSFGPQ KSSSGQMDSV ATPENSSISM ADDEVGSQRS RSAGTDLDDV  300
DQPEAKRWRG EVENECMSAA PGSRAVREPR VVVQTTSDID ILDDGYRWRK YGQKVVKGNP  360
NPRSYYKCTH PNCPVRKHVE RAAHDLRAVI TTYEGKHNHD VPAARGSGMS RAVAPPNNGA  420
VPAMAIRPSA VNYMSSNAGN SHSYQTNQVM PSSFEGAGPL SPFTLQLLQN TGNFGFSGYL  480
NQPQYSDNNM FS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-106	WRKY family protein