PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62009509-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 342aa MW: 37663.3 Da PI: 6.5312 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.7 | 2.4e-09 | 154 | 201 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L+ ++P + +k Ka +L + ++Y++sLq AUR62009509-RA 154 SHSLAERVRREKISERMKTLQAIVPGC----DKVTGKALMLDEIINYVQSLQ 201 8*************************9....555*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 342 aa Download sequence |
MAAFQQYPAS FLVDSVFMPA IKTPEIGAFN EFIAKSNQFY ASSEKSQDPF TIYSQEGSSI 60 DNEPSSVSEK QRTESLSMAD KGDSSDQMTQ SSVPVDKKRK SRKGSSSNSA NSKDVKQAKC 120 KKQKEDKEAM KDTSDEPPKG YIHVRARRGQ ATDSHSLAER VRREKISERM KTLQAIVPGC 180 DKVTGKALML DEIINYVQSL QSQVEFLSMK LASLDPMVYN FGLMDHDPMM FGTQAMTNGM 240 TLPMQPLVQP TSNGGSSIDQ PQAFATTNAV SCSTTSSAST PTFTSPVVDS STSLIQQQEQ 300 KPSLLPLQKD ALLIPSLGFP DQDADDYMYW GYHKSGRFTV KT |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 97 | 124 | KKRKSRKGSSSNSANSKDVKQAKCKKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-50 | bHLH family protein |