PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009472-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 311aa MW: 34296.9 Da PI: 5.5637

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009472-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	55.1	1.3e-17	37	86	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ L++l+P++ +K +Ka+ L +++eYI++Lq AUR62009472-RA 37 RSKHSETEQRRRSKINERFQILKDLIPPN----EQKRDKASLLLEVIEYIRYLQ 86 899***********************8....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MVRTVRPHHQ PQEDEEDDAE DVAAEGKSAE QKPSNYRSKH SETEQRRRSK INERFQILKD 60 LIPPNEQKRD KASLLLEVIE YIRYLQEKLQ VYEGPYQQQA WPHEATKLIP WRANHGPVDN 120 YANHSQVMKN GFLDENSSVQ PMTAIQGSVE PEFGGEFSFR ADHHHAGSVN PVVPMSIPLQ 180 PCTYPPGRGI LPIENVASHP HGSSAADGSI LLSEDGTFER GSSSVSDIYS QGLLKRLTQE 240 LQTSGVDLSQ ANISVQLDVG KGGNSSSNAI APTIEDVDNQ SPINQPISHA VEVSAKESIQ 300 AAKRIRTGER *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-51	bHLH family protein