PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62008866-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 162aa MW: 18582.8 Da PI: 9.8379 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.5 | 5e-08 | 30 | 58 | 3 | 30 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 3 rahnerErrRRdriNsafeeLrellPk.a 30 ++h +Er+RR+++N+ + Lr+l P AUR62008866-RA 30 MSHITVERNRRRQMNDHLKVLRSLTPCfY 58 6899**********************844 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MKNPCMAAEH INPRKHHLRR CHRTPKTHTM SHITVERNRR RQMNDHLKVL RSLTPCFYIK 60 KELVASCNSP IADVEAKISG SNVVLRVISK RTHGQLLKII STLEKLSFKI LHLNISSMDD 120 TVLYYFVVKI GLECQLSMEE LAAEVQRCFC TNDTINKITE I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06120.1 | 4e-44 | bHLH family protein |