PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008438-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 365aa MW: 40914.7 Da PI: 6.7929

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008438-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.8	1.7e-56	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++kv + ++++ ++i evd++k+ePwdLpk++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ AUR62008438-RA 17 LPPGFRFHPTDEELISHYLAPKVIDINFSA-RAIGEVDLNKCEPWDLPKRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR- 109 79************************99.89***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkg+k++Wvmheyrle AUR62008438-RA 110 GKSLVGMKKTLVFYKGRAPKGQKSNWVMHEYRLE 143 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MENMSSVLAG DQEPMDLPPG FRFHPTDEEL ISHYLAPKVI DINFSARAIG EVDLNKCEPW 60 DLPKRAKMGE KEWYFFCVRD RKYPTGLRTN RATEAGYWKA TGKDKEIYRG KSLVGMKKTL 120 VFYKGRAPKG QKSNWVMHEY RLEGKSSLQN LPSNAKNEWV ICRVFQKSAA GKKIPFPGLI 180 PPDSFGAEFN PSSILPPLMD SSPYNTNYGA PHVSCFSNPM ETTAQTSHYH NTNQQPSFDG 240 LINNNPYNSI PSNPSDNLYF RFGSGNNNSY YPSSQPGHYS GNYMMSEQHI LKAILENHGT 300 EMKQSMKTEV VNYSASQDTG LSSDMNAEIS SVVSNYDMSR RPFDDPDGPS TSGGPVDLDT 360 LWNY*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MENMSSVLAG DQEPMDLPPG FRFHPTDEEL ISHYLAPKVI DINFSARAIG EVDLNKCEPW  60
DLPKRAKMGE KEWYFFCVRD RKYPTGLRTN RATEAGYWKA TGKDKEIYRG KSLVGMKKTL  120
VFYKGRAPKG QKSNWVMHEY RLEGKSSLQN LPSNAKNEWV ICRVFQKSAA GKKIPFPGLI  180
PPDSFGAEFN PSSILPPLMD SSPYNTNYGA PHVSCFSNPM ETTAQTSHYH NTNQQPSFDG  240
LINNNPYNSI PSNPSDNLYF RFGSGNNNSY YPSSQPGHYS GNYMMSEQHI LKAILENHGT  300
EMKQSMKTEV VNYSASQDTG LSSDMNAEIS SVVSNYDMSR RPFDDPDGPS TSGGPVDLDT  360
LWNY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-136	NAC family protein