PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008370-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 676aa MW: 74104.3 Da PI: 8.8887

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008370-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	77.2	1.9e-24	171	226	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv +r+aed +++++tYeg Hnh+ AUR62008370-RA 171 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPV----QRCAEDMSILITTYEGAHNHP 226 58*************************9995....67999***************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MKGKSRKRKI LITIIVNDGG GNNGKEIVNE DESLTQSTVE HNIKKDSDVN KQGKELESTK 60 AEIGRSPSLD SKKGYTNSKL SSPSKLATNH SKNVDMEANE RSLDLGLECK FKASSTMDHH 120 QNLNGTKDGE ALKSNNVTSG GNSNGDDELV HQPPMKKARV SVRVRCDTPT MNDGCQWRKY 180 GQKIAKGNPC PRAYYRCTVA PSCPVQRCAE DMSILITTYE GAHNHPLPVS ATAMASTTSA 240 AAYMLMSKSS TSSNLGSPPY TTTTTTPIGE QLHGGLKFNI LNNSEQNPFF SPNSSTFSPT 300 PIHPTVTLDL TSTPLSSTNN NQFNKVAPNL GSRYSSTNLT FNFSENSNNN NPLYSWSNGL 360 LPSYGTQSYI KNTLNNSPLN NIGLSNNNTY NFQSNLLQKS NISHNNPPNN HDTFAQAAKV 420 LTSDPSFQSI LTATLSSFIN GNNGNANSKI VGNYTSNSHL EGGGRHTSST NSSLFQSTSN 480 KDTNGCVSSL SNKAEYYRWE NTGKLTFRSF LTALCFIANK VVTMSTPSRK RLMRDFKRLQ 540 QDPPAGISGA PHDNNIMLWN AVIFGPDDTP WDGGTFKLTL QFTEDYPNKP PSVRFISRMF 600 HPNIYADGSI CLDILQNQWS PIYDVAAILT SIQSLLCDPN PNSPANSEAA RLFSENKREY 660 NRRVREIVEQ SWTAD*

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MKGKSRKRKI LITIIVNDGG GNNGKEIVNE DESLTQSTVE HNIKKDSDVN KQGKELESTK  60
AEIGRSPSLD SKKGYTNSKL SSPSKLATNH SKNVDMEANE RSLDLGLECK FKASSTMDHH  120
QNLNGTKDGE ALKSNNVTSG GNSNGDDELV HQPPMKKARV SVRVRCDTPT MNDGCQWRKY  180
GQKIAKGNPC PRAYYRCTVA PSCPVQRCAE DMSILITTYE GAHNHPLPVS ATAMASTTSA  240
AAYMLMSKSS TSSNLGSPPY TTTTTTPIGE QLHGGLKFNI LNNSEQNPFF SPNSSTFSPT  300
PIHPTVTLDL TSTPLSSTNN NQFNKVAPNL GSRYSSTNLT FNFSENSNNN NPLYSWSNGL  360
LPSYGTQSYI KNTLNNSPLN NIGLSNNNTY NFQSNLLQKS NISHNNPPNN HDTFAQAAKV  420
LTSDPSFQSI LTATLSSFIN GNNGNANSKI VGNYTSNSHL EGGGRHTSST NSSLFQSTSN  480
KDTNGCVSSL SNKAEYYRWE NTGKLTFRSF LTALCFIANK VVTMSTPSRK RLMRDFKRLQ  540
QDPPAGISGA PHDNNIMLWN AVIFGPDDTP WDGGTFKLTL QFTEDYPNKP PSVRFISRMF  600
HPNIYADGSI CLDILQNQWS PIYDVAAILT SIQSLLCDPN PNSPANSEAA RLFSENKREY  660
NRRVREIVEQ SWTAD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	3e-44	WRKY family protein