PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62007469-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 371aa MW: 42954.1 Da PI: 6.8228

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62007469-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.1	4.7e-55	7	135	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL++kv+++k+ ++ik+vd+yk+ePwdL++ k+++ee+ ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++ AUR62007469-RA 7 VPPGFRFHPTDEELVDYYLREKVAARKMC--DIIKDVDLYKIEPWDLQElcKISSEEQhEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 99 69*********************9954..58**********954555554445******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k++l+g++ktLvfykgrap+g+k+dW+mheyrle AUR62007469-RA 100 YS-KHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 135 .899*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MNTLSHVPPG FRFHPTDEEL VDYYLREKVA ARKMCDIIKD VDLYKIEPWD LQELCKISSE 60 EQHEWYFFSH KDKKYPTGTR TNRATKAGFW KATGRDKAIY SKHNLIGMRK TLVFYKGRAP 120 NGQKSDWIMH EYRLETNENG TPQEEGWVVC RVFKKRMATV RKLDDSPCWY DDQLSFMPDM 180 DSPRRIPHHP NNYHTPNHSN FHQHRHNMYP CKQELEIAPY NISHHDPFLQ LPQLESPKMP 240 QASMQSCNSM PPYGTNTNLS SSLLVQDQMI HSQQFDSMYG NVCGSEQVED QVTDWRVLDK 300 FVASQLSQDE QHGPSAANKE INYSNVPIFP VSEHMNMVIS PNSNKQGHLG ASSDQYASTS 360 NSSCQIDMWN *

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MNTLSHVPPG FRFHPTDEEL VDYYLREKVA ARKMCDIIKD VDLYKIEPWD LQELCKISSE  60
EQHEWYFFSH KDKKYPTGTR TNRATKAGFW KATGRDKAIY SKHNLIGMRK TLVFYKGRAP  120
NGQKSDWIMH EYRLETNENG TPQEEGWVVC RVFKKRMATV RKLDDSPCWY DDQLSFMPDM  180
DSPRRIPHHP NNYHTPNHSN FHQHRHNMYP CKQELEIAPY NISHHDPFLQ LPQLESPKMP  240
QASMQSCNSM PPYGTNTNLS SSLLVQDQMI HSQQFDSMYG NVCGSEQVED QVTDWRVLDK  300
FVASQLSQDE QHGPSAANKE INYSNVPIFP VSEHMNMVIS PNSNKQGHLG ASSDQYASTS  360
NSSCQIDMWN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-145	NAC family protein