PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62007361-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 413aa MW: 43902.8 Da PI: 5.8653

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62007361-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.5	2.4e-07	301	322	1	22
XXXXCHHHCHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRq 22 e+elkr+rrkq+NRe+ArrsR+ AUR62007361-RA 301 ERELKRQRRKQSNRESARRSRL 322 89*******************6 PP
2	bZIP_1	25.5	2.9e-08	338	376	25	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ae++eL+++++ L++eN L++el++++ +++l +e+ AUR62007361-RA 338 QAECDELAQRAEGLKEENANLRSELNRIRSDYEQLLAEN 376 79*********************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MGESETDKPA KEPKTPVAVS SQEQTSATST AAVNPEWSGF QAYSPIPPPP GFLASSPQAH 60 PYMWGVQHMM PPYGTPPHPY MAMYPHGGLY AHPSMPPGSY PFSPFAMPSP NGVAEAPGNT 120 PASAEVDGKH TEGKEKLPIK RSKGILGSLN MITGKNNGEG KSTGPAGNGA CSKSAESASD 180 GSSEGSDANS QNDSGERQEA QEADVSQSGN SSVAAQNGVL NAPHTMVNHA LAMVPMTAPG 240 APAPVPGPAT NLNIGMDYWG APASSPVPAM RGKVPSAPVT TGIVPAGSRD NLQSQLWLQD 300 ERELKRQRRK QSNRESARRS RLPYKIVPFF LFLEIGIQAE CDELAQRAEG LKEENANLRS 360 ELNRIRSDYE QLLAENTALK ERLGENPEDL GSNRAERHMI SETKESSKTD QV*

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MGESETDKPA KEPKTPVAVS SQEQTSATST AAVNPEWSGF QAYSPIPPPP GFLASSPQAH  60
PYMWGVQHMM PPYGTPPHPY MAMYPHGGLY AHPSMPPGSY PFSPFAMPSP NGVAEAPGNT  120
PASAEVDGKH TEGKEKLPIK RSKGILGSLN MITGKNNGEG KSTGPAGNGA CSKSAESASD  180
GSSEGSDANS QNDSGERQEA QEADVSQSGN SSVAAQNGVL NAPHTMVNHA LAMVPMTAPG  240
APAPVPGPAT NLNIGMDYWG APASSPVPAM RGKVPSAPVT TGIVPAGSRD NLQSQLWLQD  300
ERELKRQRRK QSNRESARRS RLPYKIVPFF LFLEIGIQAE CDELAQRAEG LKEENANLRS  360
ELNRIRSDYE QLLAENTALK ERLGENPEDL GSNRAERHMI SETKESSKTD QV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-133	bZIP family protein