PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007071-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 280aa    MW: 32176.9 Da    PI: 6.551
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007071-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.62.1e-52111401129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eel+++yLkkkv+ +k++l +vi+++d++k+ePwd+++  k+ +  +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  AUR62007071-RA  11 VPPGFRFHPTEEELLQYYLKKKVAFEKIDL-DVIRDIDLNKLEPWDIQEkcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKMI 104
                     69****************************.9***************952444443456************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +s +++ +g++ktLvfykgrap+gek+dW+mheyrle
  AUR62007071-RA 105 HS-NNKRIGMRKTLVFYKGRAPHGEKSDWIMHEYRLE 140
                     **.9999****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MNLSVNGHSQ VPPGFRFHPT EEELLQYYLK KKVAFEKIDL DVIRDIDLNK LEPWDIQEKC  60
KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKMIHSNNKR IGMRKTLVFY  120
KGRAPHGEKS DWIMHEYRLE DCGTNTVHGH SIITYEDEIT NIHDHPTTCT STATNNIIPT  180
YSCCTETTPS IEASNHQLLL NNQFSVEDDQ YNLPMLTCSN NSSPQPFEHH HDDDPMLTCS  240
RNTTSLSDWM TLDRLIASQL NGQDHHQDLM CSNSVMYHR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.14e-87NAC family protein