PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007060-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 329aa    MW: 36287.4 Da    PI: 8.2211
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007060-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-11123170254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r +  e+Er+RRdr+ +++ +Lr ++P+       K++ a+ L  Av+YI++L
  AUR62007060-RA 123 RSSPAEAERKRRDRLSQRLCTLRAVVPNV-----SKMDRASLLSDAVDYINKL 170
                     666789**********************6.....5***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MKMSERFYTT SLHKFLDIED TNSVIGQLMS SGTHLWLVDV DGKLNYSRCE RAWEARQNNI  60
QTLVFLPISP GGVIEVGSLD VIKEDRSLID LTYSIFGAGG DGNMNITSRN SNRRSAPATA  120
VPRSSPAEAE RKRRDRLSQR LCTLRAVVPN VSKMDRASLL SDAVDYINKL KSRVSLLEDN  180
LGVLQNRIPT VAHLQDQNLH QPERQNNPAV NSLLYNQHLQ QPGDQNPTVP VPQLAAMVNT  240
NMQLKVEVKL LGAEMIVQAQ SSGLDYPAAK LMNVLRDLNL VISNATISNV DVDGFVLQNV  300
VVKRPPEGNG FIGTQEGLTN AILQRLQI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130135ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.19e-31bHLH family protein