PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006885-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 330aa    MW: 37188.4 Da    PI: 8.0352
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006885-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM120.81.2e-375815825128
             NAM  25 gkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgekt 119
                     ++++++  +i+e+d+yk++Pw+Lp ++  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ +   ++ g+kk Lvfy g+apkg+kt
  AUR62006885-RA  58 SQRISV-PIIAEIDLYKFDPWQLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKTLGIKKALVFYAGKAPKGVKT 149
                     555666.67***************6666689*************************************98..778******************** PP

             NAM 120 dWvmheyrl 128
                     +W+mheyrl
  AUR62006885-RA 150 NWIMHEYRL 158
                     *******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MTKQLKSTIM RGAYVVTPDW IVNTCLGCGQ LSACHPSNVG SAVDALYWDI TPLLECASQR  60
ISVPIIAEID LYKFDPWQLP GMALYGEKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA  120
DKPIGKPKTL GIKKALVFYA GKAPKGVKTN WIMHEYRLAN VDRSAGKRTN LRLDDWVLCR  180
IYNKKGVIEK DYSIDQKSKP MSMPNSMAQY SDFEDQKPNI STPGQTVPMG YMTPSPIAPV  240
KNDLLHFDTS DSVPRCHTDT SGSNHVASPE FMCDKEVQSD PKWNELGKSN FDLPPFNYMD  300
PFPEDPFGPT VQFQNDQMTN FHDIYMLLR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.11e-100NAC family protein