PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006837-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 320aa    MW: 35107.6 Da    PI: 4.7363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006837-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.19.2e-46111372128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppG+rF+Ptdeel +++Lk+kv gk+l   ++i+e+d+yk+ePwdLp  +++k++++ wyfF++r++ky++g r nr+t++gyWk+tg+d + + 
  AUR62006837-RA  11 PPGVRFQPTDEELFMFFLKRKVLGKSLGP-QMISEIDVYKFEPWDLPamAHLKTKDRYWYFFCPRSRKYPSGGRVNRTTNRGYWKSTGTDSPTKY 104
                     9*************************988.88***************5337888999************************************99 PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++vg  ktL+f+ g+apkge+t+Wvmhey l
  AUR62006837-RA 105 -ASRDVGKIKTLIFHMGKAPKGERTNWVMHEYIL 137
                     .9999***************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEELLFNKSF PPGVRFQPTD EELFMFFLKR KVLGKSLGPQ MISEIDVYKF EPWDLPAMAH  60
LKTKDRYWYF FCPRSRKYPS GGRVNRTTNR GYWKSTGTDS PTKYASRDVG KIKTLIFHMG  120
KAPKGERTNW VMHEYILADK LLADKGVPQD SYVICKIFEK SGAGPKNGED YGAHFIEEEW  180
DSDNEGNVQG SKSGLDMDCG RVDNSPCVAD SVISLSLGAP KPSPSTIAAI TTPYIAAATS  240
LDVPIAAPLS ASVSNASATS MEPASVLPTS EDELDRLLAS FTEDAADGDI FRGLGDLVDP  300
SDWGDPSSPG FFEMNDLLK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.13e-71NAC family protein