PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006836-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 316aa    MW: 34978.4 Da    PI: 4.5365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006836-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM116.23.2e-36211417128
             NAM  17 eyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy 109
                     +yLk+kv gk+l++ ++i+e+d+yk+ePwdLp  +++k++++ wyfF++r+ ky+tgkr++r++ +gyWk+tg dkev+  +++ vg  k Lvf+
  AUR62006836-RA   2 YYLKRKVLGKSLSVPQMISELDVYKFEPWDLPemACLKTKDRYWYFFCPRSMKYPTGKRSSRTAVNGYWKSTGVDKEVKY-EERCVGKIKHLVFH 95 
                     8*************999**************95448899999********************99***************9.9999********** PP

             NAM 110 kgrapkgektdWvmheyrl 128
                     +g++p+g +t+W+m ey l
  AUR62006836-RA  96 NGKSPNGARTNWMMYEYVL 114
                     *****************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MYYLKRKVLG KSLSVPQMIS ELDVYKFEPW DLPEMACLKT KDRYWYFFCP RSMKYPTGKR  60
SSRTAVNGYW KSTGVDKEVK YEERCVGKIK HLVFHNGKSP NGARTNWMMY EYVLNDPLLA  120
DKGVPQDSYA ICKIFEKSGA GPKNGEEYGA RFVEEQWDSD SDENVQERTS GLVSCDMSCG  180
TSAVTSTPHI AAATSSTTTA VMGTTYIAAT TSSTTTAVMG VPYLAAPTSS TATCMGTPYI  240
SPTTSLDVPI AAPLDVPIAA PFSPLSLDVS EEDEVDRLLQ HFTDDAEDFE DIFLGLEDLD  300
NSFIEMNDLI RYTKN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.13e-61NAC family protein