PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006298-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 455aa    MW: 50288 Da    PI: 7.3052
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006298-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68e-31142199260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +Dgy+WrKYGqK+vkgse+prsYY+C++++Cp+kkkvers  ++ v+ei+Y+g+Hnh+k
  AUR62006298-RA 142 EDGYCWRKYGQKQVKGSENPRSYYKCSHPTCPTKKKVERSP-EGYVTEIVYKGSHNHPK 199
                     8****************************************.***************85 PP
2WRKY106.21.6e-33307365159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k++er+++d+++v++tYeg+Hnh+
  AUR62006298-RA 307 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSSGCPVRKHIERASHDTRAVITTYEGKHNHD 365
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MAPSSLTVAD PSPLASSSSF LNTPNAFSPS IFLDSPLLNS FPSPTVGAFG GESFNWTQLG  60
ANKDEGRSNN NFTFHASNNS IEGWNLDEPK KQNEMINKDQ INSKPEFNTN INNQIMNTTQ  120
SDATRGYNAT PVQMNRAQKR AEDGYCWRKY GQKQVKGSEN PRSYYKCSHP TCPTKKKVER  180
SPEGYVTEIV YKGSHNHPKP QPGRRSSAQN NSNSGFDGSE GSNAALIQAQ TDNYSSFTPE  240
TSSVSVDEDD EFDQTSAMSK SARDDDHEPE SKRWKGENEG EVMSGYGNRT VKEPRVIVQT  300
TSEIDILDDG YRWRKYGQKV VKGNPNPRSY YKCTSSGCPV RKHIERASHD TRAVITTYEG  360
KHNHDVPAAR GSASYNNAPM PVRPSAIASQ PNQIIGLRPL NNNISSASRP EAHQSPFSLQ  420
MLQNTGSFGF SGFGNNSEAK EEPIDNMFFE SFLR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-108WRKY family protein