PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62006247-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 331aa MW: 36916.1 Da PI: 7.2035 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 94.3 | 8.2e-30 | 60 | 177 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT..................---......--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..................ggkke....esktltledesgrsWevkliyrkksgryvltkGWkeFvkang 73 f+k ltpsdv+k++rlv+pk++ae++ g + +++ l +edesg+ W+++++y+++s++yvltkGW+++vk+++ AUR62006247-RA 60 FEKPLTPSDVGKLNRLVIPKQHAEKYfplanatavadssgdkitG---AvaggGGVLLGFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKEKK 151 99**************************99999888887655551...055558899************************************** PP --TT-EEEEEE-SS.SEE..EEEEE-S CS B3 74 LkegDfvvFkldgr.sefelvvkvfrk 99 L++gD+v+F+++ r ++ +++++++r+ AUR62006247-RA 152 LDAGDVVLFQRH-RfESDRFFIGWRRR 177 **********75.4588889****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MDHHHHQKPL PFFYHSSLPL SSKLDDVDSD NNSTSTATAN IDRSETTSSS PSSADQEYMF 60 EKPLTPSDVG KLNRLVIPKQ HAEKYFPLAN ATAVADSSGD KITGAVAGGG GVLLGFEDES 120 GKCWKFRYSY WNSSQSYVLT KGWSRYVKEK KLDAGDVVLF QRHRFESDRF FIGWRRRGSA 180 PSPHHHHNHH PPAPNNNQIR YNNHQSNYSV APSQGYNNGA TQQHQIASFP SYRPDSLHAG 240 TEVRQKGRKS GGGNSKRVRL FGVNLECQIN DDLEEDEEPQ TSDGSSLSSQ GQAQLHPGSG 300 FSSGYDATGP TTYNYFDYMG YQPNQHYPSH M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11580.1 | 2e-57 | B3 family protein |