PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006223-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 277aa    MW: 31807.2 Da    PI: 8.589
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006223-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM133.41.6e-4131362127
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvka..eekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     +pGfrF Pt+eel+++yL++k++g+   +++ vi+ v iy+++PwdLp+    ++++  + +ew+fF+++++++a+g r+nr t+ gyWkatg+ 
  AUR62006223-RA   3 APGFRFYPTEEELISFYLQQKLQGRGtQDIDGVIPVVYIYDYNPWDLPQlsgkRCRNdpQLQEWFFFIPKQEREANGGRPNRLTTLGYWKATGSP 97 
                     59**********************995566678**************965666333333555********************************* PP

             NAM  90 kevlskkgelvglkktLvfykg..rapkgektdWvmheyr 127
                      +v+s +++++g+k+t+vfy+g  r+++g+ktdW m+ey 
  AUR62006223-RA  98 SNVYS-SNKVIGIKRTMVFYRGraRSRSGSKTDWKMNEYI 136
                     *****.8999**********8733677899*********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEAPGFRFYP TEEELISFYL QQKLQGRGTQ DIDGVIPVVY IYDYNPWDLP QLSGKRCRND  60
PQLQEWFFFI PKQEREANGG RPNRLTTLGY WKATGSPSNV YSSNKVIGIK RTMVFYRGRA  120
RSRSGSKTDW KMNEYIAIDD QSSSSTNPAP SQKGEFTVCR VYIKSKSLRA FDRRPAAPPP  180
PPMNRPVLVH QVDNDQPSSS EQARSRVETR RWRSSESSSS SGGHHQAAAN NNNNTNDPSR  240
GTNYNNNDQL NILMDMEVYD QQELLWEWDD SWMNNF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-64NAC family protein