PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006151-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 353aa    MW: 38354.5 Da    PI: 4.6263
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006151-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.5e-12114164255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + +h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI +Lq
  AUR62006151-RA 114 KISHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYITELQ 164
                     5689************************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MGDSISSFFD DQDLCDPTFS GLPASPEDLF SIFDALEGLK EAAITGSGSG SGSVDEDTTK  60
GGFMMSFQDL SETELDALEA ELGDNEQPKS KRAKIVALEE TETVGQVGGE DGSKISHITV  120
ERNRRKQMNE HLSVLRSLMP CFYVKRGDQA SIIGGVVDYI TELQQLLQAL EAKKQRKVYN  180
EVLSPRVVSS PRPSPQVLSP RKPPLSPRIN LPISPRTPQP GSPYRPRMNI SSAMGSPIDL  240
SPSSSSSSIN DCFPNELVAN SRSPMAVVEV KFSGPNLLLK TVSPRIPGQV VKIISTLEDL  300
SFEILHINII TVEDTMLNSF TIKIGIECQL SAEELAHQIQ QTFCSTPLIN FN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.17e-86bHLH family protein