PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006095-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MIKC_MADS
Protein Properties Length: 213aa    MW: 24558.9 Da    PI: 9.0115
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006095-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.71.1e-26958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien +nrqvt+skRr+g++KK +EL +LCda++ +iifs tgkl++++
  AUR62006095-RA  9 KRIENRTNRQVTYSKRRQGLMKKTKELAILCDAQIGLIIFSGTGKLHTFP 58
                    79***********************************************8 PP
2K-box65.51.9e-22821651194
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                     + + e+l+ el+ L++ i+n ++ +R++lGedL++L l+ Lq+ eqqLe+sl+ iR +Kn+l+ +q+e+l++ke+ lq +n ++
  AUR62006095-RA  82 HDNREELYSELQALREAIHNAEQDIRNYLGEDLGPLPLEVLQKHEQQLESSLNIIRVRKNQLMQQQMENLRRKEQLLQTDNGNM 165
                     456899*************************************************************************99775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MGRGKIEMKR IENRTNRQVT YSKRRQGLMK KTKELAILCD AQIGLIIFSG TGKLHTFPES  60
SNSLGQTIQR YLNVQGIQLP VHDNREELYS ELQALREAIH NAEQDIRNYL GEDLGPLPLE  120
VLQKHEQQLE SSLNIIRVRK NQLMQQQMEN LRRKEQLLQT DNGNMYRWMP FIYGGEDQPS  180
SSTVLQLATS SSSPHQYCPY RLQPTHPNLQ DL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.23e-60MIKC_MADS family protein