PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005966-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 632aa MW: 70214.5 Da PI: 4.9037

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005966-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.3	1.3e-52	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptd el+++yL+ k++gk++ + +ikevdi++vePwdLp +++k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++ AUR62005966-RA 11 LPLGFRFKPTDVELIDHYLRLKINGKENAV-ACIKEVDICRVEPWDLPdlSAIKTNDHEWFFFCPRDRKYPNGQRSNRATEAGYWKATGKDRSIK 104 699**********************888.88**********96448899999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+ l+g+kktLvfy+grapkg++t+Wv+heyr AUR62005966-RA 105 QGKKGLIGMKKTLVFYTGRAPKGQRTSWVIHEYRT 139 9999***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MGALAMPFET LPLGFRFKPT DVELIDHYLR LKINGKENAV ACIKEVDICR VEPWDLPDLS 60 AIKTNDHEWF FFCPRDRKYP NGQRSNRATE AGYWKATGKD RSIKQGKKGL IGMKKTLVFY 120 TGRAPKGQRT SWVIHEYRTT LQELDGTNPG QGAFVLCRLF KKADDLKPDD NDDGSHTDEV 180 ETNICSPNPT NITQEDIRSG PAVFAASPLS VEQSVEQQLI SETCVVKTCD SITSETVFPN 240 HARVNEEIVH EVDSHINEPF RFNDSPDSYY TWQSMQMNQE PVGMEDIFPA DFGDGHNGLH 300 LQDINGTVEA SGYMGSFMNQ DVLFYKEPHG DPFAESDMWK NSSGKESGSC SGSDVEVAQL 360 KHDVGFIGCI TGDKNYNEPE GYKELIQNYP LADDDSIFDD DVLYRFLGDT STVQPNNCPP 420 TLVSGGCMKT EDNQIGGSNA ITIRSRACNR QFPSSNNFAG QGTAKRRLRL QTFKGEDSDS 480 TVTEGIAPHE DIICLADLAE NSVAADGNES CLDDVKVVET GIKIRTHLQR SQPSAANSVE 540 QGTAKRRIRL QKRYTSIAEA DAFKPSVTEF RSLSEEVCEK QCADNSEGRS KNHSLFKRSA 600 PVLMIKVVIV VFLFMACFGL WIARSVFILS S*

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MGALAMPFET LPLGFRFKPT DVELIDHYLR LKINGKENAV ACIKEVDICR VEPWDLPDLS  60
AIKTNDHEWF FFCPRDRKYP NGQRSNRATE AGYWKATGKD RSIKQGKKGL IGMKKTLVFY  120
TGRAPKGQRT SWVIHEYRTT LQELDGTNPG QGAFVLCRLF KKADDLKPDD NDDGSHTDEV  180
ETNICSPNPT NITQEDIRSG PAVFAASPLS VEQSVEQQLI SETCVVKTCD SITSETVFPN  240
HARVNEEIVH EVDSHINEPF RFNDSPDSYY TWQSMQMNQE PVGMEDIFPA DFGDGHNGLH  300
LQDINGTVEA SGYMGSFMNQ DVLFYKEPHG DPFAESDMWK NSSGKESGSC SGSDVEVAQL  360
KHDVGFIGCI TGDKNYNEPE GYKELIQNYP LADDDSIFDD DVLYRFLGDT STVQPNNCPP  420
TLVSGGCMKT EDNQIGGSNA ITIRSRACNR QFPSSNNFAG QGTAKRRLRL QTFKGEDSDS  480
TVTEGIAPHE DIICLADLAE NSVAADGNES CLDDVKVVET GIKIRTHLQR SQPSAANSVE  540
QGTAKRRIRL QKRYTSIAEA DAFKPSVTEF RSLSEEVCEK QCADNSEGRS KNHSLFKRSA  600
PVLMIKVVIV VFLFMACFGL WIARSVFILS S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	9e-82	NAC family protein