PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005858-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 487aa MW: 52379.4 Da PI: 6.7052

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005858-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.6	5.9e-34	237	293	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+agCpvkkkvers d++v+ei+Y+g+Hnh+ AUR62005858-RA 237 DDGYNWRKYGQKQVKGSEYPRSYYKCTHAGCPVKKKVERSL-DGQVTEIIYKGQHNHQ 293 8**************************************.*************8 PP
2	WRKY	47.2	4.6e-15	418	456	21	59
-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +sYY+Ct+agC+v+k+ver+a+dpk+v++tYeg+H+h+ AUR62005858-RA 418 RKSYYKCTYAGCNVRKHVERAASDPKAVITTYEGKHDHD 456 469***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MADNKDAPSS AKPPPAPPST SSSSQRPTIT LPSRAGIESL FTGSGIGLSP GPMTLVSNFF 60 SENDPDSDCR SFSQLLAGAM ASPRPPSEPD QLRFKDNRPS VLVISPPPQP PSQQGGAGGG 120 GFFMLSPGIS PATLLDSPGL FPGQGPFGMS HQQALAQVTA QAVQAQANLH MQGGFQSSLA 180 LGPSASEPFP GFAPDSSMQK NITSSAHDSR DIKESAQVSG SDQRSQYSSI IVDKPADDGY 240 NWRKYGQKQV KGSEYPRSYY KCTHAGCPVK KKVERSLDGQ VTEIIYKGQH NHQPPQKRSK 300 DSGNNNENLG TQGNPESVSQ PQASNLNSTS DSMAYSLHKR DQESSQATTE QLSSDEEEVG 360 NGGTREAEGD EDEPNAKRRI TEVRVTEQAA SHRTVTEPRI IVQTTSEVDL LDDGYRWRKS 420 YYKCTYAGCN VRKHVERAAS DPKAVITTYE GKHDHDVPAA RMSSHNTANS SSQLRPHNSA 480 VNTNSYA

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MADNKDAPSS AKPPPAPPST SSSSQRPTIT LPSRAGIESL FTGSGIGLSP GPMTLVSNFF  60
SENDPDSDCR SFSQLLAGAM ASPRPPSEPD QLRFKDNRPS VLVISPPPQP PSQQGGAGGG  120
GFFMLSPGIS PATLLDSPGL FPGQGPFGMS HQQALAQVTA QAVQAQANLH MQGGFQSSLA  180
LGPSASEPFP GFAPDSSMQK NITSSAHDSR DIKESAQVSG SDQRSQYSSI IVDKPADDGY  240
NWRKYGQKQV KGSEYPRSYY KCTHAGCPVK KKVERSLDGQ VTEIIYKGQH NHQPPQKRSK  300
DSGNNNENLG TQGNPESVSQ PQASNLNSTS DSMAYSLHKR DQESSQATTE QLSSDEEEVG  360
NGGTREAEGD EDEPNAKRRI TEVRVTEQAA SHRTVTEPRI IVQTTSEVDL LDDGYRWRKS  420
YYKCTYAGCN VRKHVERAAS DPKAVITTYE GKHDHDVPAA RMSSHNTANS SSQLRPHNSA  480
VNTNSYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-124	WRKY family protein