PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005821-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 288aa    MW: 32911.8 Da    PI: 5.3564
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005821-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM129.62.4e-40510328128
             NAM  28 leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122
                     +++ ++i+evdiyk++Pw+Lp k++ +e+ewyfF++rd+ky++g r+nrat sgyWkatg+dk+++s + + vg+kk Lvfykgr pkg+ktdW+
  AUR62005821-RA   5 CPV-SIIPEVDIYKFDPWQLPDKAEFGENEWYFFTPRDRKYPNGIRPNRATLSGYWKATGTDKAIYS-GAKYVGIKKALVFYKGRPPKGSKTDWI 97 
                     555.68***************99999*****************************************.999************************ PP

             NAM 123 mheyrl 128
                     mheyrl
  AUR62005821-RA  98 MHEYRL 103
                     ****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSRPCPVSII PEVDIYKFDP WQLPDKAEFG ENEWYFFTPR DRKYPNGIRP NRATLSGYWK  60
ATGTDKAIYS GAKYVGIKKA LVFYKGRPPK GSKTDWIMHE YRLTESKHQP IKQHGSMRLD  120
DWVLCRIYKK RYVARAEERA EDSSSSPQGQ ISMVERGASD VSSNQNEPEI KFPRTQSLSY  180
LLDLDYLGPI AHLLNDNTSY NSSFDIQTIP RNEAEPCVST AGPSEEVAGE KEDSEDERLL  240
ATSIALAEKE AEKKQYELEA ENQKLKDELK AEREETAKAK TELEATQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.17e-82NAC family protein