PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005772-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 447aa MW: 50303.3 Da PI: 5.1645

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005772-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.6e-52	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk ++a+ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ AUR62005772-RA 15 LLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKFDPWDLPKFASAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 108 579*************************.89***********8888899***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg+ktdW+mhe+rl AUR62005772-RA 109 eGNKCIGLKKSLVFYQGRAAKGVKTDWMMHEFRL 142 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MNEKTNEGEK VDEVLLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL DIYKFDPWDL 60 PKFASAGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG NKCIGLKKSL 120 VFYQGRAAKG VKTDWMMHEF RLPSLGDATL TKRCVDKNLP ANDSWAICRI FKKTGPTNSR 180 THFHSWVSPS PDLTHPNLTS RLPPSSSCNN PNFSPDNMIK TSCSSPMQQP NSSNNINELD 240 QFLGSPDNYS SFLDQIPTFK PIYPTTSTYN TDETISNDNN LLANIATLLD FPPCYTLPQL 300 ENPSDPSNKS NNIDTSSMLL NMSSSVLGNF DKHTDGNAEF GMLPNINGKC HDFSPVTLSQ 360 EHMQRVNVED DEQVHREYCG DDQQDFACTL LGNLNNMLYA DDNGHQWDGI ETIGSIPISD 420 LLPPLAMPET WKSSSSLIWD CAPPLS*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MNEKTNEGEK VDEVLLPGFR FHPTDEELVG FYLKRKIQQR PLSIELIKQL DIYKFDPWDL  60
PKFASAGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG NKCIGLKKSL  120
VFYQGRAAKG VKTDWMMHEF RLPSLGDATL TKRCVDKNLP ANDSWAICRI FKKTGPTNSR  180
THFHSWVSPS PDLTHPNLTS RLPPSSSCNN PNFSPDNMIK TSCSSPMQQP NSSNNINELD  240
QFLGSPDNYS SFLDQIPTFK PIYPTTSTYN TDETISNDNN LLANIATLLD FPPCYTLPQL  300
ENPSDPSNKS NNIDTSSMLL NMSSSVLGNF DKHTDGNAEF GMLPNINGKC HDFSPVTLSQ  360
EHMQRVNVED DEQVHREYCG DDQQDFACTL LGNLNNMLYA DDNGHQWDGI ETIGSIPISD  420
LLPPLAMPET WKSSSSLIWD CAPPLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-101	NAC family protein