PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005699-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 302aa    MW: 33830.6 Da    PI: 6.5753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005699-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-10173220455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++++P +    +k   K+ +L   ++YI+ Lq
  AUR62005699-RA 173 SHSLAERVRRQKISEKMKLLQSIVPGC----DKIAGKIPTLDNIIDYIHTLQ 220
                     79************************9....899****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MSATWYQQPS SFLCVVDDGQ QHPHFQSTHH PASNYDTGGS SCTSNLTAMP HNINHNYSWI  60
CDNFSTFEDF SQYYDSHQQY YQGTDVNELT AVPENTKSST IHPEGTRQNT KGRQRSRRTD  120
KKKDNVLEKK NNTTQNICKK GEEKTICDNK EDASGCKDGC VYVRAKRGQA IGSHSLAERV  180
RRQKISEKMK LLQSIVPGCD KIAGKIPTLD NIIDYIHTLQ DQVKSLMTEI ALVDPTFDVN  240
YLALESIVTH LESSYATTDV SECSRIASQY QSIPLYGSSA QAVSALPSPW LALLEDREYT  300
I*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123RRTDKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.35e-33bHLH family protein