PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005387-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 431aa MW: 48029.6 Da PI: 6.1914

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005387-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.9	8.9e-14	281	323	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 Er+RR+riN+++ Lr l+Pk +K+ Ka++L A++YI +L AUR62005387-RA 281 LTERNRRQRINDGILSLRALVPKI-----TKMHKAATLSDAIDYIEEL 323 67*******************7.....7*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MCHLETALEW LRPLVLDSGI WDYCVLWKLG DDPSRFIEFL GCCCNGGGKQ EMGLRKRIRE 60 KNNSMQFCRD VNYVHPAYTN SCQVLANLPQ FMSIYSGLHG DVVLSCQPRW LTKKSDSKMS 120 TEESCGTHVL IPVFGGLVEL YSSKHVEEDE SVIEYVKSQF NIYSELETMS TSTISFDGQS 180 IDPFLDIKSN SGLSSLNQPN IPAWPQPSML PSIAQRYSDS TLDGSSTGSF PSDEHPSPDS 240 NPCSVSQDIP SKPLMACHKD PVIVQEKHGL KRGTGKSKNL LTERNRRQRI NDGILSLRAL 300 VPKITKMHKA ATLSDAIDYI EELNNEIKEL QDELKSLIEE DSDEKHTLKL KADLGEKVSK 360 PKQASSVTER LKANVQVNQL GNGNFLLRII CQQKPGVYTK LLEALSALGL PIKDANLTTY 420 DGQVSTIFTV Q

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MCHLETALEW LRPLVLDSGI WDYCVLWKLG DDPSRFIEFL GCCCNGGGKQ EMGLRKRIRE  60
KNNSMQFCRD VNYVHPAYTN SCQVLANLPQ FMSIYSGLHG DVVLSCQPRW LTKKSDSKMS  120
TEESCGTHVL IPVFGGLVEL YSSKHVEEDE SVIEYVKSQF NIYSELETMS TSTISFDGQS  180
IDPFLDIKSN SGLSSLNQPN IPAWPQPSML PSIAQRYSDS TLDGSSTGSF PSDEHPSPDS  240
NPCSVSQDIP SKPLMACHKD PVIVQEKHGL KRGTGKSKNL LTERNRRQRI NDGILSLRAL  300
VPKITKMHKA ATLSDAIDYI EELNNEIKEL QDELKSLIEE DSDEKHTLKL KADLGEKVSK  360
PKQASSVTER LKANVQVNQL GNGNFLLRII CQQKPGVYTK LLEALSALGL PIKDANLTTY  420
DGQVSTIFTV Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	8e-41	bHLH family protein