PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004950-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 286aa    MW: 30017.8 Da    PI: 6.3698
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004950-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.1e-09134178554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++        + a++L + v+Y+k L
  AUR62004950-RA 134 HSIAERLRRERIAERMKALQELVPSC-----NMTDRAAMLDEIVDYVKFL 178
                     99***********************8.....4699************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MANNQPHHHH HEGLGDEFFE QILSVPGYNT GGGSDGGGFV GGGSGGGDGS SILLGLGPGD  60
GSGHGGESDS MHLSNLFPAF GQLQHQSLRP APPSIQVHQT FQGHTAPGPA PPMSHPPAIR  120
PRVRARRGQA TDPHSIAERL RRERIAERMK ALQELVPSCN MTDRAAMLDE IVDYVKFLRL  180
QVKVLSMSRL GGAGAVAQLV ADVPPSSAEG EGVDGAQAAW EKWSSDGTEQ QVAKLMEQDI  240
GAAMQFLQSK ALCIMPVSLA SAIFRSQPPP PDPPAIIKPE ANPPP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139144RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.36e-53bHLH family protein